Alignment report

Viewing 5 reply threads
  • Author
    Posts
    • #13933
      DryIceFun
      Participant

      Hey everyone, I have a question regarding an alignment report.
      Does someone know a program/web-based tool that aligns amino acids and/or nucleotides AND creates a report that tells me something like "amino acid on position 123 F is converted to L"
      Until now I do it manually…quite time consuming…

      Thanks for all hints!

      P.S.: Freeware would be best…but Shareware is OK also…

    • #101802
      JackBean
      Participant

      hi, no need to post twice 😉

      anyway, I don’t think there is anything like that…

    • #101814
      canalon
      Participant

      I just saw Geneious in action (OK the free version is limited but it will do quite a lot of things, including alignment).It does notgenerate a report, but the color coded alignments generated make the detection of mismatches quite fast.

    • #101817
      JackBean
      Participant

      well, like every alinment tool can do that

    • #101821
      canalon
      Participant

      I guess so, just saying that it does not take that long to spot the inconsistent color (or the weird color in the consensus line).
      But I do not know anything that would align then generates a report.

    • #101834
      JackBean
      Participant

      agree, I was thinking about writing that as well, but then I thougth, that’s not what he asked for, so not to writte…

Viewing 5 reply threads
  • You must be logged in to reply to this topic.