Biology Forum › Molecular Biology › Restricion map.
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- October 24, 2008 at 2:45 pm #10318
khushiParticipantI am trying to construct restriction map with following data..
E cor1——–2
Ecor 1+Asp 1…..1.6,.4
Asp 1….0.9,2.1,2.4,3.6.
I am trying to make linear map.Can anyone help?
- October 25, 2008 at 1:28 am #86711eddburtonParticipant
your data looks a bit ropey, I’m assuming that the numbers are lengths of fragments in terms of bases.
How have you got more fragments with a single Asp1 digest than your double digest?
Also shouldn’t each digest total fragment lengths add up to the same number?
- October 25, 2008 at 3:03 am #86713khushiParticipant
Yeah if it would have been same length then it would have been easy to make map….that’s what is confusing me.
Isolated gene from an EcoR I digest contains a single Asp 1 restriction site but no other restriction sites.The gene is inserted into a plasmid digested with Ecor 1 and the plasmid with the insert selected,grown up and plasmid isolated.A probe prepared by labeling the original gene is used to analyze southern blots of three different restriction digest.prepare a map of the insert region containing the gene and explain southern blot data?
Asp 1—–3.6,2.4,2.1,.9
Asp 1+Ecor 1——1.6,.4
Ecor 1….2
I tried to solve this..I need to make a linear map…..
- October 27, 2008 at 3:34 pm #86751blcr11Participant
The Asp1 alone digest looks to be impossible to me. You should see only two bands. They most likely won’t be the same as the EcoRI + AspI double-digest as the band lengths will be determined by how far the AspI site is from the nearest vector-derived AspI site(s). The only bands you should see are the AspI-AspI fragments that carry either the 0.4 or 1.6 kb portion of the EcoRI band. You can’t see four bands unless this is a partial digest; you should see two bands, and you may only see 1 band if the AspI gods are against you.
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